BLAST_PAN
README

BLAST_PAN compares a set of 10 - 50 protein sequences against an NCBI/BLAST protein or database using blastp or tblastn, and then re-sorts the results to show sequences that are similar to all the queries


Your e-mail address (required):


Select the Blast Program you wish to use:
Select a NCBI/BLAST database:
(Smaller databases are more efficient; consider limiting the taxonomy.)


Input format:
Enter a list of queries:


Upload from file:

Color set:
set01234567
0 0 1 2 3 4 5 6 7
1 0 1 2 3 4 5 6 7
2 0 1 2 3 4 5 6 7
3 0 1 2 3 4 5 6 7
4 0 1 2 3 4 5 6 7
5 0 1 2 3 4 5 6 7


Search Options

Choose an organism from the list to limit your BLAST search:

or enter your organism name or taxonomic class here:      
      Explore the taxonomy database at NCBI


Upload confirming database:

Query hit total log(Eval): Identity threshold: Exclude hits over threshold

Other BLAST options: Expect


Comments and suggestions to:< wrp@virginia.edu >